|
KMID : 1132720210190030032
|
|
Genomics & Informatics
2021 Volume.19 No. 3 p.32 ~ p.32
|
|
|
Draft genome of Semisulcospira libertina, a species of freshwater snail
|
|
Gim Jeong-An
Baek Kyung-Wan
Hah Young-Sool
Choo Ho-Jin
Kim Ji-Seok
Yoo Jun-Il
|
|
|
Abstract
|
|
|
|
Semisulcospira libertina, a species of freshwater snail, is widespread in East Asia. It is important as a food source. Additionally, it is a vector of clonorchiasis, paragonimiasis, metagonimiasis, and other parasites. Although S. libertina has ecological, commercial, and clinical importance, its whole-genome has not been reported yet. Here, we revealed the genome of S. libertina through de novo assembly. We assembled the whole-genome of S. libertina and determined its transcriptome for the first time using Illumina NovaSeq 6000 platform. According to the k-mer analysis, the genome size of S. libertina was estimated to be 3.04 Gb. Using RepeatMasker, a total of 53.68% of repeats were identified in the genome assembly. Genome data of S. libertina reported in this study will be useful for identification and conservation of S. libertina in East Asia.
|
|
|
KEYWORD
|
|
|
de novo assembly, draft genome, Semisulcospisa libertina
|
|
|
FullTexts / Linksout information
|
|
|
|
|
|
Listed journal information
|
|
 
|
|